Googleapis Genomics

Connector for the googleapis-genomics API, generated deterministically from its OpenAPI spec (endpoints, auth, and methods match the spec exactly — nothing is invented).

• Base URL: https://genomics.googleapis.com
• Auth: OAuth 2.0 (user-delegated) — attach an InTouch oauth credential. Mint one with itcli.py /oauth <provider> (device-code) or /google-auth (Google); the server auto-refreshes the access token before each run, so the connector never handles or stores tokens.

Operations

• genomics_projects_operations_list — GET /v2alpha1/{name} — Lists operations that match the specified filter in the request. Authorization r
• genomics_pipelines_run — POST /v2alpha1/pipelines:run — Runs a pipeline. The returned Operation's metadata field will contain a google.g
• genomics_workers_checkin — POST /v2alpha1/workers/{id}:checkIn — The worker uses this method to retrieve the assigned operation and provide perio
• genomics_projects_workers_checkin — POST /v2alpha1/{id}:checkIn — The worker uses this method to retrieve the assigned operation and provide perio
• genomics_projects_operations_cancel — POST /v2alpha1/{name}:cancel — Starts asynchronous cancellation on a long-running operation. The server makes a

Inputs

• a linked oauth credential (no key inputs) — the server injects a fresh Authorization: Bearer from it
• operation — one of the operations above
• path parameters when an operation's path contains {...}
• query — optional JSON object of query params
• body — JSON object for create/update ops

Example

operation: genomics_projects_operations_list
# (attach an 'oauth' credential to the task — no inline secrets)